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Payroll Services Fees & Outsourcing Costs Explained

Understanding payroll service fees in 2025 helps businesses save costs, ensure compliance, and streamline workforce management through smarter outsourcing.

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Cam is Floowi´s CEO.
by
Cam Velasco
5 years of Experience

Empowering marketing agencies with top-tier offshore talent from LATAM. Passionate about bridging the gap and redefining global hiring for growing companies.

Expert in
Marketing

Contents

Understanding payroll service fees is crucial for companies in 2025 as they navigate complex employment laws and seek effective workforce management solutions. Businesses are increasingly considering outsourcing options to reduce administrative burdens while ensuring compliance with evolving tax regulations and labor laws that demand specialized knowledge and time.

Outsourced payroll costs require careful evaluation of fee structures, service quality, and provider capabilities, which impact both short-term expenses and long-term effectiveness. Modern payroll services fees reflect advanced technology, compliance management, and additional services beyond check processing, making it essential to assess pricing models to find the best fit for specific business needs.

Close-up of a person's hands typing on a laptop keyboard, representing administrative tasks, data entry, or managing financial records.


Overview of Payroll Processing Charges

Payroll Service ModelDescriptionTypical Fee Structure
In-house PayrollHandled internally using accounting or HR staff and payroll software.Software license fee plus employee time.
Full-Service Payroll ProviderEnd-to-end payroll processing by a third party.Monthly base fee plus per-employee charge.
Online Payroll SoftwareCloud-based platforms that businesses use themselves (e.g., Gusto, QuickBooks).Subscription fee, sometimes tiered.
Accountant or Bookkeeper-ManagedOutsourced to a freelance accountant or bookkeeping service.Hourly rate or flat monthly fee.
Employer of Record (EOR)A third party becomes the legal employer for international payroll compliance.Premium pricing, bundled services.

What Is a Payroll Fee

Payroll service fees reflect companies’ costs when outsourcing employee compensation management to third-party firms. Basic services typically range from $2 to $15 per employee per month, while comprehensive packages, including HR support and benefits management, can cost between $50 and $150 per employee. Major industry players like ADP, Paychex, and Gusto often charge a base fee plus per-employee costs that increase with workforce size and selected features.

Average Payroll Costs by Service Type

Payroll software like Gusto or QuickBooks typically costs $40 to $80 monthly, with an extra $6 to $12 per employee. Full-service payroll providers charge a monthly base rate of $100 to $200, plus $10 to $20 per employee. Companies using Professional Employer Organizations (PEOs) face monthly fees of $150 to $250 per employee, covering HR and compliance services. Additionally, small businesses might hire freelance accountants for $200 to $500 monthly, depending on complexity.

Here’s a cost comparison table for clarity:

Service TypeMonthly Base FeePer Employee Fee
Payroll Software$40 to $80$6 to $12
Full-Service Provider$100 to $200$10 to $20
PEOOften bundled$150 to $250 (all-in)
Accountant/Bookkeeper$200 to $500Usually, a flat rate

Comparing In-House vs. Outsourced Payroll

Managing in-house payroll typically costs full-time employees $1,000 to $3,000 monthly, plus software expenses. There are also hidden costs like training, compliance risks, and the opportunity cost of staff focusing on administrative tasks instead of strategic initiatives. In contrast, outsourcing payroll services usually costs small businesses $200 to $800 per month, reducing compliance liabilities, decreasing administrative workload, and providing access to specialized expertise that would otherwise require significant investment in staff training and technology.

Payroll Pricing Structures

Pricing models vary by provider and services offered. Companies typically charge monthly payroll services fees per employee, a flat monthly rate, or offer bundled packages that include additional HR or compliance support. These options help businesses of all sizes manage payroll within their budget. We will explore each pricing method further and provide examples to aid your decision-making.

Per Employee Per Month (PEPM)

The per-employee-per-month (PEPM) model is a common pricing structure for payroll services, charging a fixed monthly fee per employee. This model offers predictable outsourced payroll costs and scales easily with company growth, making it popular among small—to mid-sized enterprises.

Key features of PEPM:

  • Definition: A flat fee charged monthly for each employee on payroll
  • Average cost range: $20 to $50 per employee per month
  • Ideal for: Businesses with stable headcounts looking for scalable pricing
  • Examples:
    • Gusto: Starts around $40 base + $6 per employee
    • ADP RUN: Varies based on custom quotes, often in the $30 to $60 PEPM range
    • Paychex Flex: Offers PEPM plans starting at about $39 + $5 per employee

This model simplifies budgeting and works best when you have consistent payroll needs month over month.

Per Pay Cycle Fees

The Per Pay Cycle fee structure charges companies each time payroll is processed, regardless of the number of employees paid. Small businesses or startups with irregular pay schedules or few employees often use this model.

Who uses it:

Small businesses with weekly or biweekly payrolls, or those preferring pay-as-you-go flexibility.

Average costs:

Typically ranges from $20 to $100 per cycle, plus $2 to $10 per employee paid.

Pros:

  • Pay only when payroll is run
  • Suitable for businesses with variable payroll schedules
  • Lower upfront monthly commitments

Cons:

  • Costs can add up with frequent pay cycles
  • Less predictable monthly budgeting
  • Some providers add fees for off-cycle runs or adjustments

This model best suits companies with infrequent payroll needs or those managing a small workforce.

Flat Monthly or Annual Rates

This pricing structure offers a fixed monthly or yearly fee, regardless of the number of employees or payroll processes. Full-service payroll providers usually provide it and include features like tax filing and compliance assistance.

  • When it works best: Ideal for businesses with stable employee counts and regular payroll schedules
  • Average costs: Typically range from $100 to $250 monthly for small businesses
  • Potential savings: Predictable costs help with budgeting and may be lower than variable models if payroll is frequent
  • Possible drawbacks: Can be more expensive for businesses with fewer employees or infrequent payroll runs, and may include limits on included services

Software-Only Costs

Business TypeMost Suitable Pricing ModelWhy It FitsExample Providers
Solopreneur with 3 EmployeesPer Pay Cycle FeesLow headcount makes PEPM less cost-effective May run payroll irregularly Prioritizes flexibility and low monthly commitmentsSurePayroll, QuickBooks Payroll
Marketing Agency with 15 EmployeesPer Employee Per Month (PEPM)Predictable monthly payroll Scales easily with team size Offers better value than a flat rate for growing businessesGusto ($40 base + $6/employee), ADP RUN
Established Company (30+ Employees)Flat Monthly or Annual RatesFixed cost simplifies budgeting Often includes compliance & HR toolsBecomes more cost-effective at higher headcountsPaychex Flex, ADP, Gusto Premium Plans
(Alternative for experienced teams of any size)Software-Only CostsGood for businesses with in-house finance skillsOffers control and automation at a lower base cost, but requires tax & compliance expertiseQuickBooks Payroll, Patriot Software

Factors That Influence Payroll Costs

Various vital elements affect payroll services fees, such as the employee count, frequency of payments, additional options like tax filing or direct deposit, and the choice between software-only or comprehensive services. Customization, compliance obligations, and specific industry requirements can also influence the total costs.

Number of Employees

  • Payroll costs often increase with more staff due to tiered pricing models.
    Some systems offer discounts as headcount grows, but monitoring pricing changes is crucial to avoid unexpected costs.

Pay Frequency

  • More frequent payroll cycles (weekly or biweekly) result in higher costs.
  • Each run involves calculations, processing, and fund transfers, which add to administrative expenses.

Required Features and Add-ons

  • Extras like time tracking, benefits administration, and multi-state tax handling raise costs.
  • These features are either billed separately or bundled in premium packages, so it’s vital to align them with your business needs.

Provider Location and Experience

  • Firms based in large or high-cost regions may charge more.
  • Experienced providers with strong compliance records often come at a premium.
  • Balance provider expertise and cost to ensure value and reliability.

Common Additional Fees in Payroll Services

Numerous providers impose additional charges that can accumulate rapidly in addition to regular processing fees. These frequently ignored expenses might consist of installation fees, processing of year-end tax forms, off-cycle payroll runs, and fees for employee modifications or garnishments. Awareness of these possible extras aids businesses in avoiding unexpected costs and enables more precise planning when budgeting for payroll service expenses.

Direct Deposit Charges

Numerous payroll companies offer direct deposit as a feature of their regular service, but a few may impose a minor fee for each transaction or per employee. These fees usually range between $0.50 and $1.50 per deposit. Nevertheless, leading providers frequently offer direct deposit at no additional charge, particularly with monthly or comprehensive service plans. Always verify if it’s included or invoiced separately.

Tax Filing and Year-End Forms

Payroll companies often charge extra for tax submissions and year-end documents like W-2s and 1099s, typically ranging from $30 to $100 annually, plus $2 to $5 per form for printing and mailing. While some providers may include quarterly filings in their packages, year-end reporting is usually an additional cost. Always check if these services are bundled or charged separately.

Setup and Cancellation Fees

Some payroll providers charge a one-time setup fee between $25 and $200, depending on your business’s complexity and data migration needs. This may cover onboarding, software setup, or compliance checks. Be cautious of cancellation fees if you end the contract early, as they are often hidden in the fine print. Carefully review the agreement to avoid unexpected charges.

Support and Compliance Services

Numerous payroll service companies offer enhanced customer support and compliance help for an extra charge. This may include dedicated account managers, real-time chat assistance, and notifications about changes in labor laws. The cost for these services can range from an additional $10 to $50 per month, depending on the provider. Although these services are not mandatory, they benefit companies that require extra support or operate across multiple states.

How Payroll Services Help You Save

Outsourcing payroll services can save your business time and money. By automating processes, reducing errors, and ensuring compliance, providers help you avoid costly penalties and focus on growth. Understanding payroll service fees is essential to evaluating the value of these solutions. Next, we will explore how payroll services enhance efficiency and cut costs.

Reducing Internal HR Costs

Outsourcing payroll services can significantly reduce HR expenses by transferring complex payroll tasks to experts. For example, Paychex supports over 745,000 clients in managing payroll processing and compliance. Companies using Paychex often see fewer payroll errors and more time for strategic HR initiatives. This shift reduces the need for additional staff and minimizes costly compliance mistakes, saving time and money.

Avoiding Payroll Errors and Penalties

Payroll errors can lead to serious legal and financial problems, including fines and loss of employee trust. While payroll outsourcing fees are an investment, they often offset the high costs of potential errors. Outsourcing payroll helps mitigate risks through automated calculations and expert compliance with changing regulations. Reliable payroll services assist businesses in meeting federal, state, and local requirements, helping to avoid audits and costly penalties.

Saving Time Through Automation

Automation in payroll services significantly reduces the time spent on manual tasks like data entry and calculations. This efficiency allows HR teams to focus on strategic initiatives rather than repetitive processing. Implementing automated systems saves time and costs each pay period, decreases errors, and enhances compliance, leading to a more reliable payroll process.

Cost-Saving Strategies for Businesses

Companies should regularly review their service packages to manage payroll service fees effectively and ensure they only pay for essential features. Negotiating costs based on employee numbers and payroll schedules can also reduce expenses. Additionally, using automation and integrating payroll with other HR systems minimizes manual work and errors, lowering costs. Choosing a transparent provider helps avoid hidden charges and improves value.

Compare Providers and Get Quotes

Choosing the exemplary payroll service starts with a thorough comparison. Here are some practical steps to help you get the best fit:

  • Use trusted review platforms like G2, Capterra, and Trustpilot to read verified customer feedback.
  • Prepare an explicit Request for Proposal (RFP) outlining your business needs and desired features.
  • Contact multiple providers to gather detailed quotes and understand their pricing models.
  • Compare the scope of services, contract terms, support options, and fees.

These steps ensure you find a partner that balances payroll outsourcing fees with quality and reliability.

Bundle Services for Better Rates

Many payroll providers offer discounts for bundled services. Combining payroll with HR management, benefits administration, and compliance assistance can lead to significant savings. These comprehensive solutions simplify operations and reduce administrative burdens, often costing less than purchasing each service separately. Exploring bundled options is a smart way to enhance value while keeping payroll service fees affordable.

Leverage Technology and Automation

Utilizing modern technology and automation can reduce payroll services fees and improve accuracy. AI-powered tools automate data entry, tax calculations, and compliance checks. Integrations with accounting and time tracking systems streamline workflows, minimizing errors and manual work. These technologies will cut costs and speed up payroll, leading to a better return on investment.

Negotiate Contract Terms

Negotiating contract terms can help small businesses lower payroll processing charges and overall payroll service costs. Many providers will adjust pricing when you communicate your needs and growth potential. By seeking customized agreements, you can secure better rates, remove unnecessary extras, and align the contract with your budget. Taking the time to negotiate maximizes the value from your payroll service provider.

Top Outsourced Payroll Providers with Competitive Fees

Floowi

Floowi provides skilled remote bookkeepers from South America who can manage payroll tasks as part of broader accounting support. While not a dedicated payroll provider, Floowi enables companies to streamline payroll processing through reliable bookkeeping talent, offering a flexible and cost-efficient solution for growing businesses.

ADP

ADP offers various business pricing levels, starting with their Essential plan at around $59 per month, plus $4–6 per employee. They are known for features like tax filing, direct deposit, and compliance assistance.

Gusto

Gusto is popular among small to medium-sized companies for its user-friendly interface and transparent pricing. Plans start at $40 per month, plus $6 per employee, and include automated payroll, benefits integration, and employee self-service tools.

Multiplier

Multiplier offers outsourced payroll and global employment solutions for businesses hiring remote teams across 150+ countries. It simplifies compliance, taxes, and payments, making it ideal for companies expanding into new markets. Costs depend on location, employee count, and services required.

Hire Full-time remote talent.


FAQs About Payroll Service Costs

What Is a Payroll Fee?

A payroll fee is the expense incurred by a provider to oversee a business’s payroll operations. This can encompass determining salaries, executing direct deposits, submitting taxes, and producing reports.

How Much Do Payroll Solutions Cost?

Payroll services generally cost between $20 and $100 monthly and $4 to $15 for each employee, depending on the service provider, the included features, and the business size.

What Are the Payroll Costs of a Company?

Payroll expenses typically account for 15% to 30% of a company’s budget. This encompasses employee salaries, benefits, and the costs associated with payroll processing.

How Much Does ADP Charge for Payroll?

ADP’s payroll costs depend on the size of the business and the features chosen. Small companies can anticipate a monthly fee of approximately $59, plus an additional $4 to $6 for each employee. To find the most precise and up-to-date pricing, it’s best to check ADP’s official pricing page.

Cam Velasco

CEO & Co-Founder

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